index-pack: fix race condition with duplicate bases
[git] / builtin / index-pack.c
1 #include "builtin.h"
2 #include "delta.h"
3 #include "pack.h"
4 #include "csum-file.h"
5 #include "blob.h"
6 #include "commit.h"
7 #include "tag.h"
8 #include "tree.h"
9 #include "progress.h"
10 #include "fsck.h"
11 #include "exec_cmd.h"
12 #include "streaming.h"
13 #include "thread-utils.h"
14
15 static const char index_pack_usage[] =
16 "git index-pack [-v] [-o <index-file>] [--keep | --keep=<msg>] [--verify] [--strict] (<pack-file> | --stdin [--fix-thin] [<pack-file>])";
17
18 struct object_entry {
19         struct pack_idx_entry idx;
20         unsigned long size;
21         unsigned int hdr_size;
22         enum object_type type;
23         enum object_type real_type;
24         unsigned delta_depth;
25         int base_object_no;
26 };
27
28 union delta_base {
29         unsigned char sha1[20];
30         off_t offset;
31 };
32
33 struct base_data {
34         struct base_data *base;
35         struct base_data *child;
36         struct object_entry *obj;
37         void *data;
38         unsigned long size;
39         int ref_first, ref_last;
40         int ofs_first, ofs_last;
41 };
42
43 #if !defined(NO_PTHREADS) && defined(NO_THREAD_SAFE_PREAD)
44 /* pread() emulation is not thread-safe. Disable threading. */
45 #define NO_PTHREADS
46 #endif
47
48 struct thread_local {
49 #ifndef NO_PTHREADS
50         pthread_t thread;
51 #endif
52         struct base_data *base_cache;
53         size_t base_cache_used;
54 };
55
56 /*
57  * Even if sizeof(union delta_base) == 24 on 64-bit archs, we really want
58  * to memcmp() only the first 20 bytes.
59  */
60 #define UNION_BASE_SZ   20
61
62 #define FLAG_LINK (1u<<20)
63 #define FLAG_CHECKED (1u<<21)
64
65 struct delta_entry {
66         union delta_base base;
67         int obj_no;
68 };
69
70 static struct object_entry *objects;
71 static struct delta_entry *deltas;
72 static struct thread_local nothread_data;
73 static int nr_objects;
74 static int nr_deltas;
75 static int nr_resolved_deltas;
76 static int nr_threads;
77
78 static int from_stdin;
79 static int strict;
80 static int do_fsck_object;
81 static int verbose;
82 static int show_stat;
83 static int check_self_contained_and_connected;
84
85 static struct progress *progress;
86
87 /* We always read in 4kB chunks. */
88 static unsigned char input_buffer[4096];
89 static unsigned int input_offset, input_len;
90 static off_t consumed_bytes;
91 static unsigned deepest_delta;
92 static git_SHA_CTX input_ctx;
93 static uint32_t input_crc32;
94 static int input_fd, output_fd, pack_fd;
95
96 #ifndef NO_PTHREADS
97
98 static struct thread_local *thread_data;
99 static int nr_dispatched;
100 static int threads_active;
101
102 static pthread_mutex_t read_mutex;
103 #define read_lock()             lock_mutex(&read_mutex)
104 #define read_unlock()           unlock_mutex(&read_mutex)
105
106 static pthread_mutex_t counter_mutex;
107 #define counter_lock()          lock_mutex(&counter_mutex)
108 #define counter_unlock()        unlock_mutex(&counter_mutex)
109
110 static pthread_mutex_t work_mutex;
111 #define work_lock()             lock_mutex(&work_mutex)
112 #define work_unlock()           unlock_mutex(&work_mutex)
113
114 static pthread_mutex_t deepest_delta_mutex;
115 #define deepest_delta_lock()    lock_mutex(&deepest_delta_mutex)
116 #define deepest_delta_unlock()  unlock_mutex(&deepest_delta_mutex)
117
118 static pthread_mutex_t type_cas_mutex;
119 #define type_cas_lock()         lock_mutex(&type_cas_mutex)
120 #define type_cas_unlock()       unlock_mutex(&type_cas_mutex)
121
122 static pthread_key_t key;
123
124 static inline void lock_mutex(pthread_mutex_t *mutex)
125 {
126         if (threads_active)
127                 pthread_mutex_lock(mutex);
128 }
129
130 static inline void unlock_mutex(pthread_mutex_t *mutex)
131 {
132         if (threads_active)
133                 pthread_mutex_unlock(mutex);
134 }
135
136 /*
137  * Mutex and conditional variable can't be statically-initialized on Windows.
138  */
139 static void init_thread(void)
140 {
141         init_recursive_mutex(&read_mutex);
142         pthread_mutex_init(&counter_mutex, NULL);
143         pthread_mutex_init(&work_mutex, NULL);
144         pthread_mutex_init(&type_cas_mutex, NULL);
145         if (show_stat)
146                 pthread_mutex_init(&deepest_delta_mutex, NULL);
147         pthread_key_create(&key, NULL);
148         thread_data = xcalloc(nr_threads, sizeof(*thread_data));
149         threads_active = 1;
150 }
151
152 static void cleanup_thread(void)
153 {
154         if (!threads_active)
155                 return;
156         threads_active = 0;
157         pthread_mutex_destroy(&read_mutex);
158         pthread_mutex_destroy(&counter_mutex);
159         pthread_mutex_destroy(&work_mutex);
160         pthread_mutex_destroy(&type_cas_mutex);
161         if (show_stat)
162                 pthread_mutex_destroy(&deepest_delta_mutex);
163         pthread_key_delete(key);
164         free(thread_data);
165 }
166
167 #else
168
169 #define read_lock()
170 #define read_unlock()
171
172 #define counter_lock()
173 #define counter_unlock()
174
175 #define work_lock()
176 #define work_unlock()
177
178 #define deepest_delta_lock()
179 #define deepest_delta_unlock()
180
181 #endif
182
183
184 static int mark_link(struct object *obj, int type, void *data)
185 {
186         if (!obj)
187                 return -1;
188
189         if (type != OBJ_ANY && obj->type != type)
190                 die(_("object type mismatch at %s"), sha1_to_hex(obj->sha1));
191
192         obj->flags |= FLAG_LINK;
193         return 0;
194 }
195
196 /* The content of each linked object must have been checked
197    or it must be already present in the object database */
198 static unsigned check_object(struct object *obj)
199 {
200         if (!obj)
201                 return 0;
202
203         if (!(obj->flags & FLAG_LINK))
204                 return 0;
205
206         if (!(obj->flags & FLAG_CHECKED)) {
207                 unsigned long size;
208                 int type = sha1_object_info(obj->sha1, &size);
209                 if (type != obj->type || type <= 0)
210                         die(_("object of unexpected type"));
211                 obj->flags |= FLAG_CHECKED;
212                 return 1;
213         }
214
215         return 0;
216 }
217
218 static unsigned check_objects(void)
219 {
220         unsigned i, max, foreign_nr = 0;
221
222         max = get_max_object_index();
223         for (i = 0; i < max; i++)
224                 foreign_nr += check_object(get_indexed_object(i));
225         return foreign_nr;
226 }
227
228
229 /* Discard current buffer used content. */
230 static void flush(void)
231 {
232         if (input_offset) {
233                 if (output_fd >= 0)
234                         write_or_die(output_fd, input_buffer, input_offset);
235                 git_SHA1_Update(&input_ctx, input_buffer, input_offset);
236                 memmove(input_buffer, input_buffer + input_offset, input_len);
237                 input_offset = 0;
238         }
239 }
240
241 /*
242  * Make sure at least "min" bytes are available in the buffer, and
243  * return the pointer to the buffer.
244  */
245 static void *fill(int min)
246 {
247         if (min <= input_len)
248                 return input_buffer + input_offset;
249         if (min > sizeof(input_buffer))
250                 die(Q_("cannot fill %d byte",
251                        "cannot fill %d bytes",
252                        min),
253                     min);
254         flush();
255         do {
256                 ssize_t ret = xread(input_fd, input_buffer + input_len,
257                                 sizeof(input_buffer) - input_len);
258                 if (ret <= 0) {
259                         if (!ret)
260                                 die(_("early EOF"));
261                         die_errno(_("read error on input"));
262                 }
263                 input_len += ret;
264                 if (from_stdin)
265                         display_throughput(progress, consumed_bytes + input_len);
266         } while (input_len < min);
267         return input_buffer;
268 }
269
270 static void use(int bytes)
271 {
272         if (bytes > input_len)
273                 die(_("used more bytes than were available"));
274         input_crc32 = crc32(input_crc32, input_buffer + input_offset, bytes);
275         input_len -= bytes;
276         input_offset += bytes;
277
278         /* make sure off_t is sufficiently large not to wrap */
279         if (signed_add_overflows(consumed_bytes, bytes))
280                 die(_("pack too large for current definition of off_t"));
281         consumed_bytes += bytes;
282 }
283
284 static const char *open_pack_file(const char *pack_name)
285 {
286         if (from_stdin) {
287                 input_fd = 0;
288                 if (!pack_name) {
289                         static char tmp_file[PATH_MAX];
290                         output_fd = odb_mkstemp(tmp_file, sizeof(tmp_file),
291                                                 "pack/tmp_pack_XXXXXX");
292                         pack_name = xstrdup(tmp_file);
293                 } else
294                         output_fd = open(pack_name, O_CREAT|O_EXCL|O_RDWR, 0600);
295                 if (output_fd < 0)
296                         die_errno(_("unable to create '%s'"), pack_name);
297                 pack_fd = output_fd;
298         } else {
299                 input_fd = open(pack_name, O_RDONLY);
300                 if (input_fd < 0)
301                         die_errno(_("cannot open packfile '%s'"), pack_name);
302                 output_fd = -1;
303                 pack_fd = input_fd;
304         }
305         git_SHA1_Init(&input_ctx);
306         return pack_name;
307 }
308
309 static void parse_pack_header(void)
310 {
311         struct pack_header *hdr = fill(sizeof(struct pack_header));
312
313         /* Header consistency check */
314         if (hdr->hdr_signature != htonl(PACK_SIGNATURE))
315                 die(_("pack signature mismatch"));
316         if (!pack_version_ok(hdr->hdr_version))
317                 die(_("pack version %"PRIu32" unsupported"),
318                         ntohl(hdr->hdr_version));
319
320         nr_objects = ntohl(hdr->hdr_entries);
321         use(sizeof(struct pack_header));
322 }
323
324 static NORETURN void bad_object(unsigned long offset, const char *format,
325                        ...) __attribute__((format (printf, 2, 3)));
326
327 static NORETURN void bad_object(unsigned long offset, const char *format, ...)
328 {
329         va_list params;
330         char buf[1024];
331
332         va_start(params, format);
333         vsnprintf(buf, sizeof(buf), format, params);
334         va_end(params);
335         die(_("pack has bad object at offset %lu: %s"), offset, buf);
336 }
337
338 static inline struct thread_local *get_thread_data(void)
339 {
340 #ifndef NO_PTHREADS
341         if (threads_active)
342                 return pthread_getspecific(key);
343         assert(!threads_active &&
344                "This should only be reached when all threads are gone");
345 #endif
346         return &nothread_data;
347 }
348
349 #ifndef NO_PTHREADS
350 static void set_thread_data(struct thread_local *data)
351 {
352         if (threads_active)
353                 pthread_setspecific(key, data);
354 }
355 #endif
356
357 static struct base_data *alloc_base_data(void)
358 {
359         struct base_data *base = xmalloc(sizeof(struct base_data));
360         memset(base, 0, sizeof(*base));
361         base->ref_last = -1;
362         base->ofs_last = -1;
363         return base;
364 }
365
366 static void free_base_data(struct base_data *c)
367 {
368         if (c->data) {
369                 free(c->data);
370                 c->data = NULL;
371                 get_thread_data()->base_cache_used -= c->size;
372         }
373 }
374
375 static void prune_base_data(struct base_data *retain)
376 {
377         struct base_data *b;
378         struct thread_local *data = get_thread_data();
379         for (b = data->base_cache;
380              data->base_cache_used > delta_base_cache_limit && b;
381              b = b->child) {
382                 if (b->data && b != retain)
383                         free_base_data(b);
384         }
385 }
386
387 static void link_base_data(struct base_data *base, struct base_data *c)
388 {
389         if (base)
390                 base->child = c;
391         else
392                 get_thread_data()->base_cache = c;
393
394         c->base = base;
395         c->child = NULL;
396         if (c->data)
397                 get_thread_data()->base_cache_used += c->size;
398         prune_base_data(c);
399 }
400
401 static void unlink_base_data(struct base_data *c)
402 {
403         struct base_data *base = c->base;
404         if (base)
405                 base->child = NULL;
406         else
407                 get_thread_data()->base_cache = NULL;
408         free_base_data(c);
409 }
410
411 static int is_delta_type(enum object_type type)
412 {
413         return (type == OBJ_REF_DELTA || type == OBJ_OFS_DELTA);
414 }
415
416 static void *unpack_entry_data(unsigned long offset, unsigned long size,
417                                enum object_type type, unsigned char *sha1)
418 {
419         static char fixed_buf[8192];
420         int status;
421         git_zstream stream;
422         void *buf;
423         git_SHA_CTX c;
424         char hdr[32];
425         int hdrlen;
426
427         if (!is_delta_type(type)) {
428                 hdrlen = sprintf(hdr, "%s %lu", typename(type), size) + 1;
429                 git_SHA1_Init(&c);
430                 git_SHA1_Update(&c, hdr, hdrlen);
431         } else
432                 sha1 = NULL;
433         if (type == OBJ_BLOB && size > big_file_threshold)
434                 buf = fixed_buf;
435         else
436                 buf = xmalloc(size);
437
438         memset(&stream, 0, sizeof(stream));
439         git_inflate_init(&stream);
440         stream.next_out = buf;
441         stream.avail_out = buf == fixed_buf ? sizeof(fixed_buf) : size;
442
443         do {
444                 unsigned char *last_out = stream.next_out;
445                 stream.next_in = fill(1);
446                 stream.avail_in = input_len;
447                 status = git_inflate(&stream, 0);
448                 use(input_len - stream.avail_in);
449                 if (sha1)
450                         git_SHA1_Update(&c, last_out, stream.next_out - last_out);
451                 if (buf == fixed_buf) {
452                         stream.next_out = buf;
453                         stream.avail_out = sizeof(fixed_buf);
454                 }
455         } while (status == Z_OK);
456         if (stream.total_out != size || status != Z_STREAM_END)
457                 bad_object(offset, _("inflate returned %d"), status);
458         git_inflate_end(&stream);
459         if (sha1)
460                 git_SHA1_Final(sha1, &c);
461         return buf == fixed_buf ? NULL : buf;
462 }
463
464 static void *unpack_raw_entry(struct object_entry *obj,
465                               union delta_base *delta_base,
466                               unsigned char *sha1)
467 {
468         unsigned char *p;
469         unsigned long size, c;
470         off_t base_offset;
471         unsigned shift;
472         void *data;
473
474         obj->idx.offset = consumed_bytes;
475         input_crc32 = crc32(0, NULL, 0);
476
477         p = fill(1);
478         c = *p;
479         use(1);
480         obj->type = (c >> 4) & 7;
481         size = (c & 15);
482         shift = 4;
483         while (c & 0x80) {
484                 p = fill(1);
485                 c = *p;
486                 use(1);
487                 size += (c & 0x7f) << shift;
488                 shift += 7;
489         }
490         obj->size = size;
491
492         switch (obj->type) {
493         case OBJ_REF_DELTA:
494                 hashcpy(delta_base->sha1, fill(20));
495                 use(20);
496                 break;
497         case OBJ_OFS_DELTA:
498                 memset(delta_base, 0, sizeof(*delta_base));
499                 p = fill(1);
500                 c = *p;
501                 use(1);
502                 base_offset = c & 127;
503                 while (c & 128) {
504                         base_offset += 1;
505                         if (!base_offset || MSB(base_offset, 7))
506                                 bad_object(obj->idx.offset, _("offset value overflow for delta base object"));
507                         p = fill(1);
508                         c = *p;
509                         use(1);
510                         base_offset = (base_offset << 7) + (c & 127);
511                 }
512                 delta_base->offset = obj->idx.offset - base_offset;
513                 if (delta_base->offset <= 0 || delta_base->offset >= obj->idx.offset)
514                         bad_object(obj->idx.offset, _("delta base offset is out of bound"));
515                 break;
516         case OBJ_COMMIT:
517         case OBJ_TREE:
518         case OBJ_BLOB:
519         case OBJ_TAG:
520                 break;
521         default:
522                 bad_object(obj->idx.offset, _("unknown object type %d"), obj->type);
523         }
524         obj->hdr_size = consumed_bytes - obj->idx.offset;
525
526         data = unpack_entry_data(obj->idx.offset, obj->size, obj->type, sha1);
527         obj->idx.crc32 = input_crc32;
528         return data;
529 }
530
531 static void *unpack_data(struct object_entry *obj,
532                          int (*consume)(const unsigned char *, unsigned long, void *),
533                          void *cb_data)
534 {
535         off_t from = obj[0].idx.offset + obj[0].hdr_size;
536         unsigned long len = obj[1].idx.offset - from;
537         unsigned char *data, *inbuf;
538         git_zstream stream;
539         int status;
540
541         data = xmalloc(consume ? 64*1024 : obj->size);
542         inbuf = xmalloc((len < 64*1024) ? len : 64*1024);
543
544         memset(&stream, 0, sizeof(stream));
545         git_inflate_init(&stream);
546         stream.next_out = data;
547         stream.avail_out = consume ? 64*1024 : obj->size;
548
549         do {
550                 ssize_t n = (len < 64*1024) ? len : 64*1024;
551                 n = pread(pack_fd, inbuf, n, from);
552                 if (n < 0)
553                         die_errno(_("cannot pread pack file"));
554                 if (!n)
555                         die(Q_("premature end of pack file, %lu byte missing",
556                                "premature end of pack file, %lu bytes missing",
557                                len),
558                             len);
559                 from += n;
560                 len -= n;
561                 stream.next_in = inbuf;
562                 stream.avail_in = n;
563                 if (!consume)
564                         status = git_inflate(&stream, 0);
565                 else {
566                         do {
567                                 status = git_inflate(&stream, 0);
568                                 if (consume(data, stream.next_out - data, cb_data)) {
569                                         free(inbuf);
570                                         free(data);
571                                         return NULL;
572                                 }
573                                 stream.next_out = data;
574                                 stream.avail_out = 64*1024;
575                         } while (status == Z_OK && stream.avail_in);
576                 }
577         } while (len && status == Z_OK && !stream.avail_in);
578
579         /* This has been inflated OK when first encountered, so... */
580         if (status != Z_STREAM_END || stream.total_out != obj->size)
581                 die(_("serious inflate inconsistency"));
582
583         git_inflate_end(&stream);
584         free(inbuf);
585         if (consume) {
586                 free(data);
587                 data = NULL;
588         }
589         return data;
590 }
591
592 static void *get_data_from_pack(struct object_entry *obj)
593 {
594         return unpack_data(obj, NULL, NULL);
595 }
596
597 static int compare_delta_bases(const union delta_base *base1,
598                                const union delta_base *base2,
599                                enum object_type type1,
600                                enum object_type type2)
601 {
602         int cmp = type1 - type2;
603         if (cmp)
604                 return cmp;
605         return memcmp(base1, base2, UNION_BASE_SZ);
606 }
607
608 static int find_delta(const union delta_base *base, enum object_type type)
609 {
610         int first = 0, last = nr_deltas;
611
612         while (first < last) {
613                 int next = (first + last) / 2;
614                 struct delta_entry *delta = &deltas[next];
615                 int cmp;
616
617                 cmp = compare_delta_bases(base, &delta->base,
618                                           type, objects[delta->obj_no].type);
619                 if (!cmp)
620                         return next;
621                 if (cmp < 0) {
622                         last = next;
623                         continue;
624                 }
625                 first = next+1;
626         }
627         return -first-1;
628 }
629
630 static void find_delta_children(const union delta_base *base,
631                                 int *first_index, int *last_index,
632                                 enum object_type type)
633 {
634         int first = find_delta(base, type);
635         int last = first;
636         int end = nr_deltas - 1;
637
638         if (first < 0) {
639                 *first_index = 0;
640                 *last_index = -1;
641                 return;
642         }
643         while (first > 0 && !memcmp(&deltas[first - 1].base, base, UNION_BASE_SZ))
644                 --first;
645         while (last < end && !memcmp(&deltas[last + 1].base, base, UNION_BASE_SZ))
646                 ++last;
647         *first_index = first;
648         *last_index = last;
649 }
650
651 struct compare_data {
652         struct object_entry *entry;
653         struct git_istream *st;
654         unsigned char *buf;
655         unsigned long buf_size;
656 };
657
658 static int compare_objects(const unsigned char *buf, unsigned long size,
659                            void *cb_data)
660 {
661         struct compare_data *data = cb_data;
662
663         if (data->buf_size < size) {
664                 free(data->buf);
665                 data->buf = xmalloc(size);
666                 data->buf_size = size;
667         }
668
669         while (size) {
670                 ssize_t len = read_istream(data->st, data->buf, size);
671                 if (len == 0)
672                         die(_("SHA1 COLLISION FOUND WITH %s !"),
673                             sha1_to_hex(data->entry->idx.sha1));
674                 if (len < 0)
675                         die(_("unable to read %s"),
676                             sha1_to_hex(data->entry->idx.sha1));
677                 if (memcmp(buf, data->buf, len))
678                         die(_("SHA1 COLLISION FOUND WITH %s !"),
679                             sha1_to_hex(data->entry->idx.sha1));
680                 size -= len;
681                 buf += len;
682         }
683         return 0;
684 }
685
686 static int check_collison(struct object_entry *entry)
687 {
688         struct compare_data data;
689         enum object_type type;
690         unsigned long size;
691
692         if (entry->size <= big_file_threshold || entry->type != OBJ_BLOB)
693                 return -1;
694
695         memset(&data, 0, sizeof(data));
696         data.entry = entry;
697         data.st = open_istream(entry->idx.sha1, &type, &size, NULL);
698         if (!data.st)
699                 return -1;
700         if (size != entry->size || type != entry->type)
701                 die(_("SHA1 COLLISION FOUND WITH %s !"),
702                     sha1_to_hex(entry->idx.sha1));
703         unpack_data(entry, compare_objects, &data);
704         close_istream(data.st);
705         free(data.buf);
706         return 0;
707 }
708
709 static void sha1_object(const void *data, struct object_entry *obj_entry,
710                         unsigned long size, enum object_type type,
711                         const unsigned char *sha1)
712 {
713         void *new_data = NULL;
714         int collision_test_needed;
715
716         assert(data || obj_entry);
717
718         read_lock();
719         collision_test_needed = has_sha1_file(sha1);
720         read_unlock();
721
722         if (collision_test_needed && !data) {
723                 read_lock();
724                 if (!check_collison(obj_entry))
725                         collision_test_needed = 0;
726                 read_unlock();
727         }
728         if (collision_test_needed) {
729                 void *has_data;
730                 enum object_type has_type;
731                 unsigned long has_size;
732                 read_lock();
733                 has_type = sha1_object_info(sha1, &has_size);
734                 if (has_type != type || has_size != size)
735                         die(_("SHA1 COLLISION FOUND WITH %s !"), sha1_to_hex(sha1));
736                 has_data = read_sha1_file(sha1, &has_type, &has_size);
737                 read_unlock();
738                 if (!data)
739                         data = new_data = get_data_from_pack(obj_entry);
740                 if (!has_data)
741                         die(_("cannot read existing object %s"), sha1_to_hex(sha1));
742                 if (size != has_size || type != has_type ||
743                     memcmp(data, has_data, size) != 0)
744                         die(_("SHA1 COLLISION FOUND WITH %s !"), sha1_to_hex(sha1));
745                 free(has_data);
746         }
747
748         if (strict) {
749                 read_lock();
750                 if (type == OBJ_BLOB) {
751                         struct blob *blob = lookup_blob(sha1);
752                         if (blob)
753                                 blob->object.flags |= FLAG_CHECKED;
754                         else
755                                 die(_("invalid blob object %s"), sha1_to_hex(sha1));
756                 } else {
757                         struct object *obj;
758                         int eaten;
759                         void *buf = (void *) data;
760
761                         assert(data && "data can only be NULL for large _blobs_");
762
763                         /*
764                          * we do not need to free the memory here, as the
765                          * buf is deleted by the caller.
766                          */
767                         obj = parse_object_buffer(sha1, type, size, buf, &eaten);
768                         if (!obj)
769                                 die(_("invalid %s"), typename(type));
770                         if (do_fsck_object &&
771                             fsck_object(obj, 1, fsck_error_function))
772                                 die(_("Error in object"));
773                         if (fsck_walk(obj, mark_link, NULL))
774                                 die(_("Not all child objects of %s are reachable"), sha1_to_hex(obj->sha1));
775
776                         if (obj->type == OBJ_TREE) {
777                                 struct tree *item = (struct tree *) obj;
778                                 item->buffer = NULL;
779                                 obj->parsed = 0;
780                         }
781                         if (obj->type == OBJ_COMMIT) {
782                                 struct commit *commit = (struct commit *) obj;
783                                 commit->buffer = NULL;
784                         }
785                         obj->flags |= FLAG_CHECKED;
786                 }
787                 read_unlock();
788         }
789
790         free(new_data);
791 }
792
793 /*
794  * This function is part of find_unresolved_deltas(). There are two
795  * walkers going in the opposite ways.
796  *
797  * The first one in find_unresolved_deltas() traverses down from
798  * parent node to children, deflating nodes along the way. However,
799  * memory for deflated nodes is limited by delta_base_cache_limit, so
800  * at some point parent node's deflated content may be freed.
801  *
802  * The second walker is this function, which goes from current node up
803  * to top parent if necessary to deflate the node. In normal
804  * situation, its parent node would be already deflated, so it just
805  * needs to apply delta.
806  *
807  * In the worst case scenario, parent node is no longer deflated because
808  * we're running out of delta_base_cache_limit; we need to re-deflate
809  * parents, possibly up to the top base.
810  *
811  * All deflated objects here are subject to be freed if we exceed
812  * delta_base_cache_limit, just like in find_unresolved_deltas(), we
813  * just need to make sure the last node is not freed.
814  */
815 static void *get_base_data(struct base_data *c)
816 {
817         if (!c->data) {
818                 struct object_entry *obj = c->obj;
819                 struct base_data **delta = NULL;
820                 int delta_nr = 0, delta_alloc = 0;
821
822                 while (is_delta_type(c->obj->type) && !c->data) {
823                         ALLOC_GROW(delta, delta_nr + 1, delta_alloc);
824                         delta[delta_nr++] = c;
825                         c = c->base;
826                 }
827                 if (!delta_nr) {
828                         c->data = get_data_from_pack(obj);
829                         c->size = obj->size;
830                         get_thread_data()->base_cache_used += c->size;
831                         prune_base_data(c);
832                 }
833                 for (; delta_nr > 0; delta_nr--) {
834                         void *base, *raw;
835                         c = delta[delta_nr - 1];
836                         obj = c->obj;
837                         base = get_base_data(c->base);
838                         raw = get_data_from_pack(obj);
839                         c->data = patch_delta(
840                                 base, c->base->size,
841                                 raw, obj->size,
842                                 &c->size);
843                         free(raw);
844                         if (!c->data)
845                                 bad_object(obj->idx.offset, _("failed to apply delta"));
846                         get_thread_data()->base_cache_used += c->size;
847                         prune_base_data(c);
848                 }
849                 free(delta);
850         }
851         return c->data;
852 }
853
854 static void resolve_delta(struct object_entry *delta_obj,
855                           struct base_data *base, struct base_data *result)
856 {
857         void *base_data, *delta_data;
858
859         if (show_stat) {
860                 delta_obj->delta_depth = base->obj->delta_depth + 1;
861                 deepest_delta_lock();
862                 if (deepest_delta < delta_obj->delta_depth)
863                         deepest_delta = delta_obj->delta_depth;
864                 deepest_delta_unlock();
865         }
866         delta_obj->base_object_no = base->obj - objects;
867         delta_data = get_data_from_pack(delta_obj);
868         base_data = get_base_data(base);
869         result->obj = delta_obj;
870         result->data = patch_delta(base_data, base->size,
871                                    delta_data, delta_obj->size, &result->size);
872         free(delta_data);
873         if (!result->data)
874                 bad_object(delta_obj->idx.offset, _("failed to apply delta"));
875         hash_sha1_file(result->data, result->size,
876                        typename(delta_obj->real_type), delta_obj->idx.sha1);
877         sha1_object(result->data, NULL, result->size, delta_obj->real_type,
878                     delta_obj->idx.sha1);
879         counter_lock();
880         nr_resolved_deltas++;
881         counter_unlock();
882 }
883
884 /*
885  * Standard boolean compare-and-swap: atomically check whether "*type" is
886  * "want"; if so, swap in "set" and return true. Otherwise, leave it untouched
887  * and return false.
888  */
889 static int compare_and_swap_type(enum object_type *type,
890                                  enum object_type want,
891                                  enum object_type set)
892 {
893         enum object_type old;
894
895         type_cas_lock();
896         old = *type;
897         if (old == want)
898                 *type = set;
899         type_cas_unlock();
900
901         return old == want;
902 }
903
904 static struct base_data *find_unresolved_deltas_1(struct base_data *base,
905                                                   struct base_data *prev_base)
906 {
907         if (base->ref_last == -1 && base->ofs_last == -1) {
908                 union delta_base base_spec;
909
910                 hashcpy(base_spec.sha1, base->obj->idx.sha1);
911                 find_delta_children(&base_spec,
912                                     &base->ref_first, &base->ref_last, OBJ_REF_DELTA);
913
914                 memset(&base_spec, 0, sizeof(base_spec));
915                 base_spec.offset = base->obj->idx.offset;
916                 find_delta_children(&base_spec,
917                                     &base->ofs_first, &base->ofs_last, OBJ_OFS_DELTA);
918
919                 if (base->ref_last == -1 && base->ofs_last == -1) {
920                         free(base->data);
921                         return NULL;
922                 }
923
924                 link_base_data(prev_base, base);
925         }
926
927         if (base->ref_first <= base->ref_last) {
928                 struct object_entry *child = objects + deltas[base->ref_first].obj_no;
929                 struct base_data *result = alloc_base_data();
930
931                 if (!compare_and_swap_type(&child->real_type, OBJ_REF_DELTA,
932                                            base->obj->real_type))
933                         die("BUG: child->real_type != OBJ_REF_DELTA");
934
935                 resolve_delta(child, base, result);
936                 if (base->ref_first == base->ref_last && base->ofs_last == -1)
937                         free_base_data(base);
938
939                 base->ref_first++;
940                 return result;
941         }
942
943         if (base->ofs_first <= base->ofs_last) {
944                 struct object_entry *child = objects + deltas[base->ofs_first].obj_no;
945                 struct base_data *result = alloc_base_data();
946
947                 assert(child->real_type == OBJ_OFS_DELTA);
948                 child->real_type = base->obj->real_type;
949                 resolve_delta(child, base, result);
950                 if (base->ofs_first == base->ofs_last)
951                         free_base_data(base);
952
953                 base->ofs_first++;
954                 return result;
955         }
956
957         unlink_base_data(base);
958         return NULL;
959 }
960
961 static void find_unresolved_deltas(struct base_data *base)
962 {
963         struct base_data *new_base, *prev_base = NULL;
964         for (;;) {
965                 new_base = find_unresolved_deltas_1(base, prev_base);
966
967                 if (new_base) {
968                         prev_base = base;
969                         base = new_base;
970                 } else {
971                         free(base);
972                         base = prev_base;
973                         if (!base)
974                                 return;
975                         prev_base = base->base;
976                 }
977         }
978 }
979
980 static int compare_delta_entry(const void *a, const void *b)
981 {
982         const struct delta_entry *delta_a = a;
983         const struct delta_entry *delta_b = b;
984
985         /* group by type (ref vs ofs) and then by value (sha-1 or offset) */
986         return compare_delta_bases(&delta_a->base, &delta_b->base,
987                                    objects[delta_a->obj_no].type,
988                                    objects[delta_b->obj_no].type);
989 }
990
991 static void resolve_base(struct object_entry *obj)
992 {
993         struct base_data *base_obj = alloc_base_data();
994         base_obj->obj = obj;
995         base_obj->data = NULL;
996         find_unresolved_deltas(base_obj);
997 }
998
999 #ifndef NO_PTHREADS
1000 static void *threaded_second_pass(void *data)
1001 {
1002         set_thread_data(data);
1003         for (;;) {
1004                 int i;
1005                 counter_lock();
1006                 display_progress(progress, nr_resolved_deltas);
1007                 counter_unlock();
1008                 work_lock();
1009                 while (nr_dispatched < nr_objects &&
1010                        is_delta_type(objects[nr_dispatched].type))
1011                         nr_dispatched++;
1012                 if (nr_dispatched >= nr_objects) {
1013                         work_unlock();
1014                         break;
1015                 }
1016                 i = nr_dispatched++;
1017                 work_unlock();
1018
1019                 resolve_base(&objects[i]);
1020         }
1021         return NULL;
1022 }
1023 #endif
1024
1025 /*
1026  * First pass:
1027  * - find locations of all objects;
1028  * - calculate SHA1 of all non-delta objects;
1029  * - remember base (SHA1 or offset) for all deltas.
1030  */
1031 static void parse_pack_objects(unsigned char *sha1)
1032 {
1033         int i, nr_delays = 0;
1034         struct delta_entry *delta = deltas;
1035         struct stat st;
1036
1037         if (verbose)
1038                 progress = start_progress(
1039                                 from_stdin ? _("Receiving objects") : _("Indexing objects"),
1040                                 nr_objects);
1041         for (i = 0; i < nr_objects; i++) {
1042                 struct object_entry *obj = &objects[i];
1043                 void *data = unpack_raw_entry(obj, &delta->base, obj->idx.sha1);
1044                 obj->real_type = obj->type;
1045                 if (is_delta_type(obj->type)) {
1046                         nr_deltas++;
1047                         delta->obj_no = i;
1048                         delta++;
1049                 } else if (!data) {
1050                         /* large blobs, check later */
1051                         obj->real_type = OBJ_BAD;
1052                         nr_delays++;
1053                 } else
1054                         sha1_object(data, NULL, obj->size, obj->type, obj->idx.sha1);
1055                 free(data);
1056                 display_progress(progress, i+1);
1057         }
1058         objects[i].idx.offset = consumed_bytes;
1059         stop_progress(&progress);
1060
1061         /* Check pack integrity */
1062         flush();
1063         git_SHA1_Final(sha1, &input_ctx);
1064         if (hashcmp(fill(20), sha1))
1065                 die(_("pack is corrupted (SHA1 mismatch)"));
1066         use(20);
1067
1068         /* If input_fd is a file, we should have reached its end now. */
1069         if (fstat(input_fd, &st))
1070                 die_errno(_("cannot fstat packfile"));
1071         if (S_ISREG(st.st_mode) &&
1072                         lseek(input_fd, 0, SEEK_CUR) - input_len != st.st_size)
1073                 die(_("pack has junk at the end"));
1074
1075         for (i = 0; i < nr_objects; i++) {
1076                 struct object_entry *obj = &objects[i];
1077                 if (obj->real_type != OBJ_BAD)
1078                         continue;
1079                 obj->real_type = obj->type;
1080                 sha1_object(NULL, obj, obj->size, obj->type, obj->idx.sha1);
1081                 nr_delays--;
1082         }
1083         if (nr_delays)
1084                 die(_("confusion beyond insanity in parse_pack_objects()"));
1085 }
1086
1087 /*
1088  * Second pass:
1089  * - for all non-delta objects, look if it is used as a base for
1090  *   deltas;
1091  * - if used as a base, uncompress the object and apply all deltas,
1092  *   recursively checking if the resulting object is used as a base
1093  *   for some more deltas.
1094  */
1095 static void resolve_deltas(void)
1096 {
1097         int i;
1098
1099         if (!nr_deltas)
1100                 return;
1101
1102         /* Sort deltas by base SHA1/offset for fast searching */
1103         qsort(deltas, nr_deltas, sizeof(struct delta_entry),
1104               compare_delta_entry);
1105
1106         if (verbose)
1107                 progress = start_progress(_("Resolving deltas"), nr_deltas);
1108
1109 #ifndef NO_PTHREADS
1110         nr_dispatched = 0;
1111         if (nr_threads > 1 || getenv("GIT_FORCE_THREADS")) {
1112                 init_thread();
1113                 for (i = 0; i < nr_threads; i++) {
1114                         int ret = pthread_create(&thread_data[i].thread, NULL,
1115                                                  threaded_second_pass, thread_data + i);
1116                         if (ret)
1117                                 die(_("unable to create thread: %s"),
1118                                     strerror(ret));
1119                 }
1120                 for (i = 0; i < nr_threads; i++)
1121                         pthread_join(thread_data[i].thread, NULL);
1122                 cleanup_thread();
1123                 return;
1124         }
1125 #endif
1126
1127         for (i = 0; i < nr_objects; i++) {
1128                 struct object_entry *obj = &objects[i];
1129
1130                 if (is_delta_type(obj->type))
1131                         continue;
1132                 resolve_base(obj);
1133                 display_progress(progress, nr_resolved_deltas);
1134         }
1135 }
1136
1137 /*
1138  * Third pass:
1139  * - append objects to convert thin pack to full pack if required
1140  * - write the final 20-byte SHA-1
1141  */
1142 static void fix_unresolved_deltas(struct sha1file *f, int nr_unresolved);
1143 static void conclude_pack(int fix_thin_pack, const char *curr_pack, unsigned char *pack_sha1)
1144 {
1145         if (nr_deltas == nr_resolved_deltas) {
1146                 stop_progress(&progress);
1147                 /* Flush remaining pack final 20-byte SHA1. */
1148                 flush();
1149                 return;
1150         }
1151
1152         if (fix_thin_pack) {
1153                 struct sha1file *f;
1154                 unsigned char read_sha1[20], tail_sha1[20];
1155                 struct strbuf msg = STRBUF_INIT;
1156                 int nr_unresolved = nr_deltas - nr_resolved_deltas;
1157                 int nr_objects_initial = nr_objects;
1158                 if (nr_unresolved <= 0)
1159                         die(_("confusion beyond insanity"));
1160                 objects = xrealloc(objects,
1161                                    (nr_objects + nr_unresolved + 1)
1162                                    * sizeof(*objects));
1163                 memset(objects + nr_objects + 1, 0,
1164                        nr_unresolved * sizeof(*objects));
1165                 f = sha1fd(output_fd, curr_pack);
1166                 fix_unresolved_deltas(f, nr_unresolved);
1167                 strbuf_addf(&msg, _("completed with %d local objects"),
1168                             nr_objects - nr_objects_initial);
1169                 stop_progress_msg(&progress, msg.buf);
1170                 strbuf_release(&msg);
1171                 sha1close(f, tail_sha1, 0);
1172                 hashcpy(read_sha1, pack_sha1);
1173                 fixup_pack_header_footer(output_fd, pack_sha1,
1174                                          curr_pack, nr_objects,
1175                                          read_sha1, consumed_bytes-20);
1176                 if (hashcmp(read_sha1, tail_sha1) != 0)
1177                         die(_("Unexpected tail checksum for %s "
1178                               "(disk corruption?)"), curr_pack);
1179         }
1180         if (nr_deltas != nr_resolved_deltas)
1181                 die(Q_("pack has %d unresolved delta",
1182                        "pack has %d unresolved deltas",
1183                        nr_deltas - nr_resolved_deltas),
1184                     nr_deltas - nr_resolved_deltas);
1185 }
1186
1187 static int write_compressed(struct sha1file *f, void *in, unsigned int size)
1188 {
1189         git_zstream stream;
1190         int status;
1191         unsigned char outbuf[4096];
1192
1193         memset(&stream, 0, sizeof(stream));
1194         git_deflate_init(&stream, zlib_compression_level);
1195         stream.next_in = in;
1196         stream.avail_in = size;
1197
1198         do {
1199                 stream.next_out = outbuf;
1200                 stream.avail_out = sizeof(outbuf);
1201                 status = git_deflate(&stream, Z_FINISH);
1202                 sha1write(f, outbuf, sizeof(outbuf) - stream.avail_out);
1203         } while (status == Z_OK);
1204
1205         if (status != Z_STREAM_END)
1206                 die(_("unable to deflate appended object (%d)"), status);
1207         size = stream.total_out;
1208         git_deflate_end(&stream);
1209         return size;
1210 }
1211
1212 static struct object_entry *append_obj_to_pack(struct sha1file *f,
1213                                const unsigned char *sha1, void *buf,
1214                                unsigned long size, enum object_type type)
1215 {
1216         struct object_entry *obj = &objects[nr_objects++];
1217         unsigned char header[10];
1218         unsigned long s = size;
1219         int n = 0;
1220         unsigned char c = (type << 4) | (s & 15);
1221         s >>= 4;
1222         while (s) {
1223                 header[n++] = c | 0x80;
1224                 c = s & 0x7f;
1225                 s >>= 7;
1226         }
1227         header[n++] = c;
1228         crc32_begin(f);
1229         sha1write(f, header, n);
1230         obj[0].size = size;
1231         obj[0].hdr_size = n;
1232         obj[0].type = type;
1233         obj[0].real_type = type;
1234         obj[1].idx.offset = obj[0].idx.offset + n;
1235         obj[1].idx.offset += write_compressed(f, buf, size);
1236         obj[0].idx.crc32 = crc32_end(f);
1237         sha1flush(f);
1238         hashcpy(obj->idx.sha1, sha1);
1239         return obj;
1240 }
1241
1242 static int delta_pos_compare(const void *_a, const void *_b)
1243 {
1244         struct delta_entry *a = *(struct delta_entry **)_a;
1245         struct delta_entry *b = *(struct delta_entry **)_b;
1246         return a->obj_no - b->obj_no;
1247 }
1248
1249 static void fix_unresolved_deltas(struct sha1file *f, int nr_unresolved)
1250 {
1251         struct delta_entry **sorted_by_pos;
1252         int i, n = 0;
1253
1254         /*
1255          * Since many unresolved deltas may well be themselves base objects
1256          * for more unresolved deltas, we really want to include the
1257          * smallest number of base objects that would cover as much delta
1258          * as possible by picking the
1259          * trunc deltas first, allowing for other deltas to resolve without
1260          * additional base objects.  Since most base objects are to be found
1261          * before deltas depending on them, a good heuristic is to start
1262          * resolving deltas in the same order as their position in the pack.
1263          */
1264         sorted_by_pos = xmalloc(nr_unresolved * sizeof(*sorted_by_pos));
1265         for (i = 0; i < nr_deltas; i++) {
1266                 if (objects[deltas[i].obj_no].real_type != OBJ_REF_DELTA)
1267                         continue;
1268                 sorted_by_pos[n++] = &deltas[i];
1269         }
1270         qsort(sorted_by_pos, n, sizeof(*sorted_by_pos), delta_pos_compare);
1271
1272         for (i = 0; i < n; i++) {
1273                 struct delta_entry *d = sorted_by_pos[i];
1274                 enum object_type type;
1275                 struct base_data *base_obj = alloc_base_data();
1276
1277                 if (objects[d->obj_no].real_type != OBJ_REF_DELTA)
1278                         continue;
1279                 base_obj->data = read_sha1_file(d->base.sha1, &type, &base_obj->size);
1280                 if (!base_obj->data)
1281                         continue;
1282
1283                 if (check_sha1_signature(d->base.sha1, base_obj->data,
1284                                 base_obj->size, typename(type)))
1285                         die(_("local object %s is corrupt"), sha1_to_hex(d->base.sha1));
1286                 base_obj->obj = append_obj_to_pack(f, d->base.sha1,
1287                                         base_obj->data, base_obj->size, type);
1288                 find_unresolved_deltas(base_obj);
1289                 display_progress(progress, nr_resolved_deltas);
1290         }
1291         free(sorted_by_pos);
1292 }
1293
1294 static void final(const char *final_pack_name, const char *curr_pack_name,
1295                   const char *final_index_name, const char *curr_index_name,
1296                   const char *keep_name, const char *keep_msg,
1297                   unsigned char *sha1)
1298 {
1299         const char *report = "pack";
1300         char name[PATH_MAX];
1301         int err;
1302
1303         if (!from_stdin) {
1304                 close(input_fd);
1305         } else {
1306                 fsync_or_die(output_fd, curr_pack_name);
1307                 err = close(output_fd);
1308                 if (err)
1309                         die_errno(_("error while closing pack file"));
1310         }
1311
1312         if (keep_msg) {
1313                 int keep_fd, keep_msg_len = strlen(keep_msg);
1314
1315                 if (!keep_name)
1316                         keep_fd = odb_pack_keep(name, sizeof(name), sha1);
1317                 else
1318                         keep_fd = open(keep_name, O_RDWR|O_CREAT|O_EXCL, 0600);
1319
1320                 if (keep_fd < 0) {
1321                         if (errno != EEXIST)
1322                                 die_errno(_("cannot write keep file '%s'"),
1323                                           keep_name);
1324                 } else {
1325                         if (keep_msg_len > 0) {
1326                                 write_or_die(keep_fd, keep_msg, keep_msg_len);
1327                                 write_or_die(keep_fd, "\n", 1);
1328                         }
1329                         if (close(keep_fd) != 0)
1330                                 die_errno(_("cannot close written keep file '%s'"),
1331                                     keep_name);
1332                         report = "keep";
1333                 }
1334         }
1335
1336         if (final_pack_name != curr_pack_name) {
1337                 if (!final_pack_name) {
1338                         snprintf(name, sizeof(name), "%s/pack/pack-%s.pack",
1339                                  get_object_directory(), sha1_to_hex(sha1));
1340                         final_pack_name = name;
1341                 }
1342                 if (move_temp_to_file(curr_pack_name, final_pack_name))
1343                         die(_("cannot store pack file"));
1344         } else if (from_stdin)
1345                 chmod(final_pack_name, 0444);
1346
1347         if (final_index_name != curr_index_name) {
1348                 if (!final_index_name) {
1349                         snprintf(name, sizeof(name), "%s/pack/pack-%s.idx",
1350                                  get_object_directory(), sha1_to_hex(sha1));
1351                         final_index_name = name;
1352                 }
1353                 if (move_temp_to_file(curr_index_name, final_index_name))
1354                         die(_("cannot store index file"));
1355         } else
1356                 chmod(final_index_name, 0444);
1357
1358         if (!from_stdin) {
1359                 printf("%s\n", sha1_to_hex(sha1));
1360         } else {
1361                 char buf[48];
1362                 int len = snprintf(buf, sizeof(buf), "%s\t%s\n",
1363                                    report, sha1_to_hex(sha1));
1364                 write_or_die(1, buf, len);
1365
1366                 /*
1367                  * Let's just mimic git-unpack-objects here and write
1368                  * the last part of the input buffer to stdout.
1369                  */
1370                 while (input_len) {
1371                         err = xwrite(1, input_buffer + input_offset, input_len);
1372                         if (err <= 0)
1373                                 break;
1374                         input_len -= err;
1375                         input_offset += err;
1376                 }
1377         }
1378 }
1379
1380 static int git_index_pack_config(const char *k, const char *v, void *cb)
1381 {
1382         struct pack_idx_option *opts = cb;
1383
1384         if (!strcmp(k, "pack.indexversion")) {
1385                 opts->version = git_config_int(k, v);
1386                 if (opts->version > 2)
1387                         die(_("bad pack.indexversion=%"PRIu32), opts->version);
1388                 return 0;
1389         }
1390         if (!strcmp(k, "pack.threads")) {
1391                 nr_threads = git_config_int(k, v);
1392                 if (nr_threads < 0)
1393                         die(_("invalid number of threads specified (%d)"),
1394                             nr_threads);
1395 #ifdef NO_PTHREADS
1396                 if (nr_threads != 1)
1397                         warning(_("no threads support, ignoring %s"), k);
1398                 nr_threads = 1;
1399 #endif
1400                 return 0;
1401         }
1402         return git_default_config(k, v, cb);
1403 }
1404
1405 static int cmp_uint32(const void *a_, const void *b_)
1406 {
1407         uint32_t a = *((uint32_t *)a_);
1408         uint32_t b = *((uint32_t *)b_);
1409
1410         return (a < b) ? -1 : (a != b);
1411 }
1412
1413 static void read_v2_anomalous_offsets(struct packed_git *p,
1414                                       struct pack_idx_option *opts)
1415 {
1416         const uint32_t *idx1, *idx2;
1417         uint32_t i;
1418
1419         /* The address of the 4-byte offset table */
1420         idx1 = (((const uint32_t *)p->index_data)
1421                 + 2 /* 8-byte header */
1422                 + 256 /* fan out */
1423                 + 5 * p->num_objects /* 20-byte SHA-1 table */
1424                 + p->num_objects /* CRC32 table */
1425                 );
1426
1427         /* The address of the 8-byte offset table */
1428         idx2 = idx1 + p->num_objects;
1429
1430         for (i = 0; i < p->num_objects; i++) {
1431                 uint32_t off = ntohl(idx1[i]);
1432                 if (!(off & 0x80000000))
1433                         continue;
1434                 off = off & 0x7fffffff;
1435                 if (idx2[off * 2])
1436                         continue;
1437                 /*
1438                  * The real offset is ntohl(idx2[off * 2]) in high 4
1439                  * octets, and ntohl(idx2[off * 2 + 1]) in low 4
1440                  * octets.  But idx2[off * 2] is Zero!!!
1441                  */
1442                 ALLOC_GROW(opts->anomaly, opts->anomaly_nr + 1, opts->anomaly_alloc);
1443                 opts->anomaly[opts->anomaly_nr++] = ntohl(idx2[off * 2 + 1]);
1444         }
1445
1446         if (1 < opts->anomaly_nr)
1447                 qsort(opts->anomaly, opts->anomaly_nr, sizeof(uint32_t), cmp_uint32);
1448 }
1449
1450 static void read_idx_option(struct pack_idx_option *opts, const char *pack_name)
1451 {
1452         struct packed_git *p = add_packed_git(pack_name, strlen(pack_name), 1);
1453
1454         if (!p)
1455                 die(_("Cannot open existing pack file '%s'"), pack_name);
1456         if (open_pack_index(p))
1457                 die(_("Cannot open existing pack idx file for '%s'"), pack_name);
1458
1459         /* Read the attributes from the existing idx file */
1460         opts->version = p->index_version;
1461
1462         if (opts->version == 2)
1463                 read_v2_anomalous_offsets(p, opts);
1464
1465         /*
1466          * Get rid of the idx file as we do not need it anymore.
1467          * NEEDSWORK: extract this bit from free_pack_by_name() in
1468          * sha1_file.c, perhaps?  It shouldn't matter very much as we
1469          * know we haven't installed this pack (hence we never have
1470          * read anything from it).
1471          */
1472         close_pack_index(p);
1473         free(p);
1474 }
1475
1476 static void show_pack_info(int stat_only)
1477 {
1478         int i, baseobjects = nr_objects - nr_deltas;
1479         unsigned long *chain_histogram = NULL;
1480
1481         if (deepest_delta)
1482                 chain_histogram = xcalloc(deepest_delta, sizeof(unsigned long));
1483
1484         for (i = 0; i < nr_objects; i++) {
1485                 struct object_entry *obj = &objects[i];
1486
1487                 if (is_delta_type(obj->type))
1488                         chain_histogram[obj->delta_depth - 1]++;
1489                 if (stat_only)
1490                         continue;
1491                 printf("%s %-6s %lu %lu %"PRIuMAX,
1492                        sha1_to_hex(obj->idx.sha1),
1493                        typename(obj->real_type), obj->size,
1494                        (unsigned long)(obj[1].idx.offset - obj->idx.offset),
1495                        (uintmax_t)obj->idx.offset);
1496                 if (is_delta_type(obj->type)) {
1497                         struct object_entry *bobj = &objects[obj->base_object_no];
1498                         printf(" %u %s", obj->delta_depth, sha1_to_hex(bobj->idx.sha1));
1499                 }
1500                 putchar('\n');
1501         }
1502
1503         if (baseobjects)
1504                 printf_ln(Q_("non delta: %d object",
1505                              "non delta: %d objects",
1506                              baseobjects),
1507                           baseobjects);
1508         for (i = 0; i < deepest_delta; i++) {
1509                 if (!chain_histogram[i])
1510                         continue;
1511                 printf_ln(Q_("chain length = %d: %lu object",
1512                              "chain length = %d: %lu objects",
1513                              chain_histogram[i]),
1514                           i + 1,
1515                           chain_histogram[i]);
1516         }
1517 }
1518
1519 int cmd_index_pack(int argc, const char **argv, const char *prefix)
1520 {
1521         int i, fix_thin_pack = 0, verify = 0, stat_only = 0;
1522         const char *curr_pack, *curr_index;
1523         const char *index_name = NULL, *pack_name = NULL;
1524         const char *keep_name = NULL, *keep_msg = NULL;
1525         char *index_name_buf = NULL, *keep_name_buf = NULL;
1526         struct pack_idx_entry **idx_objects;
1527         struct pack_idx_option opts;
1528         unsigned char pack_sha1[20];
1529         unsigned foreign_nr = 1;        /* zero is a "good" value, assume bad */
1530
1531         if (argc == 2 && !strcmp(argv[1], "-h"))
1532                 usage(index_pack_usage);
1533
1534         read_replace_refs = 0;
1535
1536         reset_pack_idx_option(&opts);
1537         git_config(git_index_pack_config, &opts);
1538         if (prefix && chdir(prefix))
1539                 die(_("Cannot come back to cwd"));
1540
1541         for (i = 1; i < argc; i++) {
1542                 const char *arg = argv[i];
1543
1544                 if (*arg == '-') {
1545                         if (!strcmp(arg, "--stdin")) {
1546                                 from_stdin = 1;
1547                         } else if (!strcmp(arg, "--fix-thin")) {
1548                                 fix_thin_pack = 1;
1549                         } else if (!strcmp(arg, "--strict")) {
1550                                 strict = 1;
1551                                 do_fsck_object = 1;
1552                         } else if (!strcmp(arg, "--check-self-contained-and-connected")) {
1553                                 strict = 1;
1554                                 check_self_contained_and_connected = 1;
1555                         } else if (!strcmp(arg, "--verify")) {
1556                                 verify = 1;
1557                         } else if (!strcmp(arg, "--verify-stat")) {
1558                                 verify = 1;
1559                                 show_stat = 1;
1560                         } else if (!strcmp(arg, "--verify-stat-only")) {
1561                                 verify = 1;
1562                                 show_stat = 1;
1563                                 stat_only = 1;
1564                         } else if (!strcmp(arg, "--keep")) {
1565                                 keep_msg = "";
1566                         } else if (!prefixcmp(arg, "--keep=")) {
1567                                 keep_msg = arg + 7;
1568                         } else if (!prefixcmp(arg, "--threads=")) {
1569                                 char *end;
1570                                 nr_threads = strtoul(arg+10, &end, 0);
1571                                 if (!arg[10] || *end || nr_threads < 0)
1572                                         usage(index_pack_usage);
1573 #ifdef NO_PTHREADS
1574                                 if (nr_threads != 1)
1575                                         warning(_("no threads support, "
1576                                                   "ignoring %s"), arg);
1577                                 nr_threads = 1;
1578 #endif
1579                         } else if (!prefixcmp(arg, "--pack_header=")) {
1580                                 struct pack_header *hdr;
1581                                 char *c;
1582
1583                                 hdr = (struct pack_header *)input_buffer;
1584                                 hdr->hdr_signature = htonl(PACK_SIGNATURE);
1585                                 hdr->hdr_version = htonl(strtoul(arg + 14, &c, 10));
1586                                 if (*c != ',')
1587                                         die(_("bad %s"), arg);
1588                                 hdr->hdr_entries = htonl(strtoul(c + 1, &c, 10));
1589                                 if (*c)
1590                                         die(_("bad %s"), arg);
1591                                 input_len = sizeof(*hdr);
1592                         } else if (!strcmp(arg, "-v")) {
1593                                 verbose = 1;
1594                         } else if (!strcmp(arg, "-o")) {
1595                                 if (index_name || (i+1) >= argc)
1596                                         usage(index_pack_usage);
1597                                 index_name = argv[++i];
1598                         } else if (!prefixcmp(arg, "--index-version=")) {
1599                                 char *c;
1600                                 opts.version = strtoul(arg + 16, &c, 10);
1601                                 if (opts.version > 2)
1602                                         die(_("bad %s"), arg);
1603                                 if (*c == ',')
1604                                         opts.off32_limit = strtoul(c+1, &c, 0);
1605                                 if (*c || opts.off32_limit & 0x80000000)
1606                                         die(_("bad %s"), arg);
1607                         } else
1608                                 usage(index_pack_usage);
1609                         continue;
1610                 }
1611
1612                 if (pack_name)
1613                         usage(index_pack_usage);
1614                 pack_name = arg;
1615         }
1616
1617         if (!pack_name && !from_stdin)
1618                 usage(index_pack_usage);
1619         if (fix_thin_pack && !from_stdin)
1620                 die(_("--fix-thin cannot be used without --stdin"));
1621         if (!index_name && pack_name) {
1622                 int len = strlen(pack_name);
1623                 if (!has_extension(pack_name, ".pack"))
1624                         die(_("packfile name '%s' does not end with '.pack'"),
1625                             pack_name);
1626                 index_name_buf = xmalloc(len);
1627                 memcpy(index_name_buf, pack_name, len - 5);
1628                 strcpy(index_name_buf + len - 5, ".idx");
1629                 index_name = index_name_buf;
1630         }
1631         if (keep_msg && !keep_name && pack_name) {
1632                 int len = strlen(pack_name);
1633                 if (!has_extension(pack_name, ".pack"))
1634                         die(_("packfile name '%s' does not end with '.pack'"),
1635                             pack_name);
1636                 keep_name_buf = xmalloc(len);
1637                 memcpy(keep_name_buf, pack_name, len - 5);
1638                 strcpy(keep_name_buf + len - 5, ".keep");
1639                 keep_name = keep_name_buf;
1640         }
1641         if (verify) {
1642                 if (!index_name)
1643                         die(_("--verify with no packfile name given"));
1644                 read_idx_option(&opts, index_name);
1645                 opts.flags |= WRITE_IDX_VERIFY | WRITE_IDX_STRICT;
1646         }
1647         if (strict)
1648                 opts.flags |= WRITE_IDX_STRICT;
1649
1650 #ifndef NO_PTHREADS
1651         if (!nr_threads) {
1652                 nr_threads = online_cpus();
1653                 /* An experiment showed that more threads does not mean faster */
1654                 if (nr_threads > 3)
1655                         nr_threads = 3;
1656         }
1657 #endif
1658
1659         curr_pack = open_pack_file(pack_name);
1660         parse_pack_header();
1661         objects = xcalloc(nr_objects + 1, sizeof(struct object_entry));
1662         deltas = xcalloc(nr_objects, sizeof(struct delta_entry));
1663         parse_pack_objects(pack_sha1);
1664         resolve_deltas();
1665         conclude_pack(fix_thin_pack, curr_pack, pack_sha1);
1666         free(deltas);
1667         if (strict)
1668                 foreign_nr = check_objects();
1669
1670         if (show_stat)
1671                 show_pack_info(stat_only);
1672
1673         idx_objects = xmalloc((nr_objects) * sizeof(struct pack_idx_entry *));
1674         for (i = 0; i < nr_objects; i++)
1675                 idx_objects[i] = &objects[i].idx;
1676         curr_index = write_idx_file(index_name, idx_objects, nr_objects, &opts, pack_sha1);
1677         free(idx_objects);
1678
1679         if (!verify)
1680                 final(pack_name, curr_pack,
1681                       index_name, curr_index,
1682                       keep_name, keep_msg,
1683                       pack_sha1);
1684         else
1685                 close(input_fd);
1686         free(objects);
1687         free(index_name_buf);
1688         free(keep_name_buf);
1689         if (pack_name == NULL)
1690                 free((void *) curr_pack);
1691         if (index_name == NULL)
1692                 free((void *) curr_index);
1693
1694         /*
1695          * Let the caller know this pack is not self contained
1696          */
1697         if (check_self_contained_and_connected && foreign_nr)
1698                 return 1;
1699
1700         return 0;
1701 }